| Barry #2 (Player chose Chimchar) | Route 203 | 6 | 10 |
| Barry #2 (Player chose Piplup) | Route 203 | 6 | 10 |
| Barry #2 (Player chose Turtwig) | Route 203 | 6 | 10 |
| Roark | Oreburgh Gym | 6 | 16 |
| Commander Mars (Double) | Valley Windworks | 6 | 22 |
| Gardenia | Eterna Gym | 6 | 28 |
| Commander Jupiter | Team Galactic Eterna Building | 6 | 34 |
| Fantina ? (Also Appears in Room 5, Separate Fight) | Hearthome Gym Room #3 | 6 | 34 |
| Fantina | Hearthome Gym Room #6 | 6 | 38 |
| Barry #3 (Player picked Chimchar) | Hearthome City → Route 209 Tunnel | 6 | 40 |
| Barry #3 (Player picked Piplup) | Hearthome City → Route 209 Tunnel | 6 | 40 |
| Barry #3 (Player picked Turtwig) | Hearthome City → Route 209 Tunnel | 6 | 40 |
| Maylene | Veilstone Gym | 6 | 47 |
| Barry #4 (Player picked Chimchar, outside of Pastoria Gym) | Pastoria City | 6 | 50 |
| Barry #4 (Player picked Piplup, outside of Pastoria Gym) | Pastoria City | 6 | 50 |
| Barry #4 (Player picked Turtwig, outside of Pastoria Gym) | Pastoria City | 6 | 50 |
| Commander Jupiter (Fog, Double Battle) | Route 210 North | 6 | 54 |
| Cyrus (Fog) | Celestic Town | 6 | 55 |
| Barry #5 (Player picked Chimchar, on Canalave Bridge) | Canalave City | 6 | 57 |
| Barry #5 (Player picked Piplup, on Canalave Bridge) | Canalave City | 6 | 57 |
| Barry #5 (Player picked Turtwig, on Canalave Bridge) | Canalave City | 6 | 57 |
| Byron | Canalave City Gym | 6 | 65 |
| Commander Saturn (Rain, Multi Battle With Galactic Titan) | Lake Valor | 5 | 65 |
| Commander Mars (Multi Battle with Galactic Terra) | Lake Verity | 5 | 65 |
| Candice (Hail) | Snowpoint Gym | 6 | 74 |
| Volkner (Double Battle) | Sunyshore Gym | 6 | 84 |
| Cyrus (Trick Room) | Veilstone Warehouse | 6 | 94 |
| Commander Saturn | Veilstone Warehouse | 6 | 92 |
| Barry (Tag Partner, if Player chose Chimchar) | LV 100 Alakazam | 4 | 100 |
| Barry (Tag Partner if Player chose Piplup) | LV 100 Slaking | 5 | 100 |
| Barry (Tag Partner, if Player chose Turtwig) | LV 100 Slaking | 4 | 100 |
| Commander Mars (Multi Battle with Commander Jupiter) | LV 100 Slaking | 4 | 89 |
| Commander Jupiter (Multi Battle with Commander Mars) | LV 100 Slaking | 3 | 95 |
| Cyrus (Double)* | DISTORTION WORLD | 6 | 97 |
| Cyrus (Shadow Tag)* | DISTORTION WORLD | 1 | 100 |
| Sinister Hooded Figure - Optional (Permanent Trick Room) | Pokémon League | 6 | 100 |
| Barry #6 (Player picked Chimchar) | Fissure | 6 | 100 |
| Barry #6 (Player picked Piplup) | Fissure | 6 | 100 |
| Barry #6 (Player picked Turtwig) | Fissure | 6 | 100 |
| Sinister Hooded Figure - Optional (Permanent Trick Room) | Fissure | 6 | 100 |
| Elite Four Aaron (Permanent Rain) | Fissure | 6 | 100 |
| Elite Four Bertha (Permanent Sandstorm) | Fissure | 6 | 100 |
| Elite Four Flint | Fissure | 6 | 100 |
| Elite Four Lucian | Fissure | 6 | 100 |
| Champion Cynthia (Permanent Gravity) | Fissure | 6 | 100 |